Studies	27,771
Biosamples	16,199
Sequencing Projects	114,377
Analysis Projects	95,113
Organisms	258,066

Your current search results are: Studies Biosamples Organisms Sequencing Projects Analysis Projects 5,544 0 6,615 6,575 6,504
Current Filters:: None Set Refine Search Filters + Study Fields Study Name   Description   Relevance OR Select from below... 1000 Genomes ALGAE Acetate production Acetone production Agricultural Algicidal Alginate synthesis Alkaliphilic enzyme production Amino acids production Animal Parasite Animal Pathogen Anti-tumor agent Antibiotic production Antibiotic resistance Anticancer agent Aquaculture Astrobiological Australian Human Microbiome Project Avian Pathogen Bacterial Pathogen Banana Pathogen Biocatalysis Biochemical Biocontrol Biodefense Biodegradation of pollutants Bioenergy Biofuels Biogeochemical Biohydrogen Bioleaching Biomass conversion Bioplastic producer Biopolymer production Bioreactors Bioremediation Biotechnological Biothreat Biowarfare Bird pathogen Built environment Butanol production Cancer treatment Canine Pathogen Carbon cycle Cattle Pathogen Cellulase production Cheese production Cheese ripening Chicken Pathogen Chimpanzee Pathogen Citric acid production Climate change Cold adaptation Commercial inoculant Comparative analysis Coral Pathogen Dairy industry Degrades RDX Dental Pathogen Detoxification Dietary supplement Dioxin-mineralizing Dolphin Pathogen EBPR Ecological Educational Energy conservation Energy production Environmental Erythromycin production Ethanol production Evolution Feline Pathogen Fermentation Fish Pathogen Food industry Food spoilage French Agency for Food, Environmental and Occupational Health & Safety (ANSES) Frog Pathogen Fungal Genome Initiative (FGI) Fungal pathogen GEBA GEBA-KMG GEBA-PCC GEBA-RNB GEBA-Single Cells Generates electricity Global carbon cycle Glutamate production Goat Pathogen Horse Pathogen Human Gut Microbiome Initiative (HGMI) Human Microbiome Human Microbiome Project (HMP) Human Oral Microbiome Project (HOMP) Human Pathogen Human Pathogen strictly Human commensal Hydrogen production Industrial Insect Pathogen Insect commensal Insect pathogen Insecticides degrader Lactic acid production Laundry detergents Lignin Malolactic fermentation Mammal Pathogen Marine Microbial Initiative (MMI) Marine Pathogen Medical Methanol production Mice Pathogen Microbial Dark Matter Model Organism Molluscs Pathogen Mouse Pathogen Natural Attenuation Nematode pathogen Nitrogen fixation Nonhuman-Primates Pathogen Nosocomial Pathogen Nystatin producer Ocean carbon cycle Oil industry Oil removal Opportunistic Pathogen Origins of Multicellularity Project (OMP) Oyester Pathogen Pathogen Pathogen in Bacteria Pest control Petroleum production Pharmaceutical Phylogenetic diversity Plant Pathogen Plant Symbiont Plastic production Porcine pathogen Poultry Poultry Pathogen Probiotic Production of bioplastics Protein production Quorum sensing Rat Pathogen Recombinant protein expression Reptile Pathogen Reptile-specific Pathogen Rhizosphere Rodent Pathogen Root Nodulating Bacteria (RNB) Ruminant Pathogen Saccharomyces Genome Resequencing Project (SGRP) Seaweed Pathogen Sequencing Technology Evaluation Sheep Pathogen Solvent production Sponge symbionts Stromatolite formation Succinic-acid production Sulfur cycle Suppresses Plant Pathogens Swine Pathogen Technology development Tree of Life Vaccine development Veterinary Vitamin C production Vitamin production Wastewater treatment Wheat Pathogen Yogurt production Ecosystem   Select from below... Engineered Environmental Host-associated Unclassified Ecosystem Category   Select from below... Air Algae Amphibia Animal Annelida Aquatic Arthropoda Bioreactor Bioremediation Biotransformation Birds Built environment Cnidaria Currency notes Echinodermata Endosymbionts Fish Food production Fungi Host-associated Human Industrial production Insecta Invertebrates Lab enrichment Lab synthesis Mammals Microbial Modeled Mollusca Plant Plants Porifera Protists Protozoa Reptilia Solid waste Terrestrial Tunicates Unclassified Vertebrates Wastewater Ecosystem Type   Select from below... Activated Sludge Agricultural field Anaerobic Anaerobic digestor Aquaculture Ascidians Bacteria Brown Algae Circulatory system City Cnidaria Composting Continuous culture Dairy products Deep subsurface Defined Defined media Digestive system Dinoflagellates Endosphere Engineered product Excretory system Fermented beverages Fermented seafood Fermented vegetables Freshwater Fungi Gastrointestinal tract Geologic Green algae House Hydrocarbon Indoor Air Industrial wastewater Integument Intracellular endosymbionts Lab synthesis Landfill Leaf Lichen Lymphatic Mammals Marine Microbial enhanced oil recovery Microbial solubilization of coal Mixed alcohol bioreactor Mollusca Mycelium Nematoda Nervous system Nodule Non-marine Saline and Alkaline Nutrient removal Oil reservoir Oomycetes Outdoor Air Peat moss Persistent organic pollutants (POP) Phylloplane Phyllosphere Red algae Reproductive system Respiratory system Rhizome Rhizoplane Rhizosphere Rock-dwelling (subaerial biofilms) Sediment Shell Simulated communities (DNA mixture) Simulated communities (microbial mixture) Simulated communities (sequence read mixture) Skin Soil Solid animal waste Sponge Symbiotic fungal gardens and galleries Tetrachloroethylene and derivatives Thermal springs Thermal springs Thiocyanate Tissue Tunicates Unclassified Undefined media Volcanic Water treatment plant Ecosystem Subtype   Select from below... (null) Aerobic media Agricultural wastewater Alkaline Anaerobic media Aquifer Ascidians Axilla Bacteria Benzene Biological phosphorus removal Blood Brain Ceca Cerebrospinal fluid Chloroethene Clay Coastal Cold seeps Coral Crop Cuticle Digestive system Dissolved organics (aerobic) Dissolved organics (anaerobic) Drinking water Ectosymbionts Ectosymbionts Egg capsule Endolithic Endophytes Endosymbionts Epiphytes Extracellular symbionts Fecal Foregut Fossil Fumaroles Fungus gallery Fungus garden Gills Grass Groundwater Gut Harbor Hindgut Hot (42-90C) Hot(42-90C) Hydrothermal vents Hypersaline Ice Intertidal Zone Intertidal zone Intertidal zone Intestine Intracellular symbionts Kidneys Lab synthesis Lake Large Intestine Large intestine Lentic Loam Lotic Lotic Lungs Lymph nodes Mammals Marginal Sea Marine intertidal flat sediment inoculum Marine media Marine sediment inoculum Medial distal leg Methane Microbialites Midgut Mine Mine water Mollusca Naris Nasopharyngeal Near-boiling (>90C) Neritic Zone Neritic zone Neritic zone Nitrogen removal Oceanic Oceanic Oil reservoir Oil seeps Oral Oral cavity Pelagic Petrochemical Plasmids Pond Ponds Porifera Primary Pulmonary system Rhizome Rhizoplane Saline Salt crystallizer ponds Sand Sand Sanger Scales Secondary Sediment Silt Slime Small intestine Soil Stomach Storm water Subcuticular space Subglacial lake Tepid (25-34C) Tetrachloroethylene Trophosome Unclassified Urethra Vagina Volar forearm Volcanic Warm (34-42C) Wetlands Wood Specific Ecosystem   Select from below... Abyssal plane Acid Mine Drainage Acidic Activated sludge Agricultural Agricultural Soil Agricultural land Agricultural land Agricultural soil Algoconsortia Alkaline Anammox Aphotic zone Athalassic Bacteria Bacteriomes Beach Benthic Bioreactor Black smokers Bog Boreal forest Buccal mucosa Carbonate Cave water Cecum Chlorinated Coalbed water Contaminated Coral reef Delivery networks Desert Diffuse flow Drainage pipe biofilm Duodenal Ectosymbionts Epibionts Epilimnion Estuary Extracellular Extracellular symbionts Fecal Forest Soil Forest soil Fossil Full-scale Garden dump Gills Glacial lake Glacier Grasslands Hypolimnion Ice accretions Intracellular Lab synthesis Limnetic zone Low land river systems Lumen Mammals Marsh Microbial mats Midpoint vagina Mine Mine drainage Mollusca Nasal cavity Neutral Oil reservoir Oil-contaminated Oil-contaminated sediment P1 segment P3 segment Pelagic Periodontal pockets Permafrost Photic zone Porifera Proctodeal segment Rectum Reticulum Rhizoplane Rumen Saliva Salt marsh Sediment Sputum Subgingival plaque Swamp Thalassic Thoracic segments Throat Trachea Tropical rainforest Uncharacterized Unclassified Uranium contaminated Urine Venous leg ulcers Viriome Wadden Sea-Germany Wetlands sediment Whale fall buccal mucosa subgingival plaque + Biosample Fields Biosample Name   Habitat   Community   Location   Ecosystem   Select from below... Engineered Environmental Host-associated Unclassified Ecosystem Category   Select from below... Air Algae Amphibia Animal Annelida Aquatic Arthropoda Bioreactor Bioremediation Biotransformation Birds Built environment Cnidaria Echinodermata Endosymbionts Fish Food production Fungi Human Industrial production Insecta Invertebrates Lab enrichment Lab synthesis Mammals Microbial Modeled Mollusca Paper Plants Porifera Protists Reptilia Solid waste Terrestrial Tunicates Unclassified Wastewater Ecosystem Type   Select from below... Activated Sludge Agricultural field Anaerobic Anaerobic digestor Aquaculture Ascidians Asphalt lakes Bacteria Brown Algae Bryozoans Canal Circulatory system City Cnidaria Composting Continuous culture Currency notes Dairy products Deep subsurface Defined media Digestive system Dinoflagellates Echinodermata Endosphere Engineered product Excretory system Fermented beverages Fermented seafood Fermented vegetables Freshwater Fungi Gastrointestinal tract Genetic cross Geologic Green algae House Hydrocarbon Indoor Air Industrial wastewater Integument Intracellular endosymbionts Landfill Leaf Lichen Lympathic system Lymphatic Marine Metal Microbial enhanced oil recovery Microbial solubilization of coal Milk Mixed alcohol bioreactor Mycelium Nematoda Nervous system Nodule Non-marine Saline and Alkaline Nutrient removal Oil reservoir Outdoor Air Peat moss Persistent organic pollutants (POP) Phylloplane Phyllosphere Platyhelminthes Red algae Reproductive system Respiratory system Rhizome Rhizoplane Rhizosphere Rock-dwelling (subaerial biofilms) Roots Sediment Shell Silage fermentation Simulated communities (DNA mixture) Simulated communities (microbial mixture) Simulated communities (sequence read mixture) Skin Soil Solid animal waste Sponge Symbiotic fungal gardens and galleries Tailings pond Terephthalate Tetrachloroethylene and derivatives Thermal springs Thiocyanate Tissue Unclassified Undefined media Volcanic Water treatment plant Ecosystem Subtype   Select from below... (null) Aerobic media Agricultural wastewater Alkaline Anaerobic media Aquifer Axilla Benzene Biological phosphorus removal Blood Brain Ceca Cerebrospinal fluid Chloroethene Clay Coastal Cold seeps Coral Crop Cuticle Digestive tube Dissolved organics (aerobic) Dissolved organics (anaerobic) Drinking water Ectosymbionts Ectosymbionts Egg capsule Endophytes Endosymbionts Epidermal mucus Epiphytes Fecal Female Foregut Fossil Fumaroles Fungus gallery Fungus garden Gills Grass Groundwater Gut Gymnolaemates Harbor Hindgut Hot (42-90C) Hydrothermal vents Hypersaline Ice Intertidal Zone Intertidal zone Intestine Kidneys Lake Landfill leachate Large Intestine Large intestine Lentic Loam Lotic Lymph nodes Marginal Sea Marine intertidal flat sediment inoculum Marine media Marine sediment inoculum Medial distal leg Methane Microbialites Midgut Mine Mine water Naris Nasopharyngeal Near-boiling (>90C) Neritic zone Nitrogen removal Oceanic Oil seeps Oral Oral cavity Ovaries Park Pelagic Petrochemical Polycyclic aromatic hydrocarbons Pond Ponds Primary Pulmonary system Pulp and paper wastewater Saline Salt crystallizer ponds Sand Sanger Sea Urchin Secondary Sediment Silt Slime Small intestine Soil Stomach Storm water Subcuticular space Subglacial lake Subway Tar Tepid (25-34C) Tetrachloroethylene Trophosome Unclassified Urethra Vagina Volar forearm Volcanic Warm (34-42C) Wastewater Wetlands Wood retroauricular crease Specific Ecosystem   Select from below... Abyssal plane Acid Mine Drainage Acidic Activated sludge Agricultural Agricultural Soil Agricultural land Agricultural soil Algoconsortia Alkaline Anammox Aphotic zone Athalassic Attached/Keratinized gingiva Bacteriomes Beach Benthic Bioreactor Black smokers Bog Boreal forest Buccal mucosa Carbonate Cave water Cecum Chlorinated Coalbed water Contaminated Coral reef Delivery networks Desert Diffuse flow Drainage pipe biofilm Duodenal Endoperitrophic space Epibionts Epilimnion Estuary Extracellular Extracellular symbionts Fecal Forest Soil Forest soil Garden dump Glacial lake Glacier Grasslands Hypolimnion Ice accretions Intracellular Introitus Limnetic zone Littoral zone Low land river systems Lumen Microbial mats Microbialites Mid stream Midpoint vagina Mine Mine drainage Nasal cavity Neutral Oil-contaminated Oil-contaminated sediment Oil-contaminated sediments Orchid rooting P1 segment P3 segment Palatine tonsils Periodontal pockets Permafrost Pharynx Photic zone Plasma Proctodeal segment Rectum Rumen Saliva Salt marsh Sediment Serum Shrubland Sigmoid colon Sputum Subgingival plaque Supragingival plaque Swamp Thalassic Thoracic segments Throat Trachea Tropical rainforest Uncharacterized Unclassified Uranium contaminated Urine Venous leg ulcers Viriome Wadden Sea-Germany Whale fall anterior nares buccal mucosa hard palate posterior fornix subgingival plaque tongue dorsum Sample Isolation Country   Select from below... Undefined Afghanistan Algeria Angola Antarctic Ocean Antarctica Arctic Ocean Argentina Armenia Atlantic Ocean Australia Austria Azerbaijan Azores Bahamas Bahrain Baltic Sea Bangladesh Barbados Belarus Belgium Belize Benin Bermuda Bhutan Black Sea Bolivia Bosnia and Herzegovina Botswana Brazil Bulgaria Burkina Faso Burma Burundi Cambodia Cameroon Canada Caucasus Chad Chile China Colombia Comoros Congo Costa Rica Croatia Cuba Cyprus Czech Republic Czechoslovakia Democratic Republic of the Congo Denmark Djibouti Dominica Dominican Republic Egypt El Salvador Equador Estonia Ethiopia European Consortium European Union Fiji Finland Former Soviet Union Former Yugoslavia France French Guiana Gabon Gambia Georgia Germany Ghana Greece Greenland Grenada Guadeloupe Guatemala Guinea Gulf of Mexico Guyana Haiti Honduras Hong Kong Hungary Iceland India Indian Ocean Indonesia International Iran Iraq Ireland Israel Italy Ivory Coast Jamaica Japan Jordan Kazakhstan Kenya Kuwait Kyrgyzstan Laos Lebanon Libya Lithuania Luxembourg Madagascar Malawi Malaysia Maldives Mali Malta Mauritius Mayotte Mediterranean Sea Mexico Micronesia Mongolia Morocco Mozambique Namibia Nepal Netherlands Netherlands Antilles New Caledonia New Zealand Nicaragua Niger Nigeria North Sea Norway Norwegian Sea Pacific Ocean Pakistan Palau Palestinian Territory, Occupied Panama Papua New Guinea Peru Philippines Poland Portugal Puerto Rico Qatar Red Sea Republic of Kiribati Republic of Togo Republic of the Congo Romania Russia Rwanda Saint Lucia Samoa Sargasso Sea Saudi Arabia Sea of Japan Senegal Serbia Singapore Slovakia Slovenia Solomon Islands Somalia South Africa South America South Korea Spain Sri Lanka Sudan Sweden Switzerland Syria Taiwan Tajikistan Tanzania Tasmania Thailand Trinidad and Tobago Tunisia Turkey Turkmenistan USA Uganda Ukraine United Arab Emirates United Kingdom Uruguay Uzbekistan Venezuela Vietnam Zambia Zimbabwe Isolation Host Name   Host Gender   Host Body Site   Select from below... Undefined Abdomen Airways Ankle Bladder Blood Bone Brain Ear Eye Gastrointestinal tract Heart Limb Liver Lung Lymph nodes Nose Oral Plant-flower Plant-leaf Plant-root Plant-stem Root Skin Spinal Cord Spleen Urogenital tract Wound Host Body Subsite   Select from below... Undefined Appendix Ascending colon Attached/Keratinized gingiva Bronchus Buccal mucosa Cecum Cerebrospinal fluid Cervix Colon Conjunctiva Crop Dental plaque Descending colon Duodenum Endometrium Endotracheal tract Foregut Gall bladder Gastric antrum Gingival crevices Groin Gum margin of molar tooth on buccal side Gut Hard palate Hindgut Hip bone Ileal-anal pouch Intestinal tract Joint Kidney Left arm Lower limb Lung Lung aspirate Macrophage Mid-vaginal wall Monocytes Mouth Nares Nasal Nasopharynx Palatine tonsils Penis Perineum Periodontal Peritoneal fluid Pharyngeal mucosa Plasma Pleural cavity Posterior fornix Rectal Respiratory tract Retroauricular crease Right arm Rumen Sigmoid colon Stomach Subgingival Subgingival plaque Supragingival plaque Surgical wound Synovial fluid Teeth Terminal ileum Throat Tongue dorsum Trachea Transverse colon Upper limb Upper respiratory tract Urethra Urinary tract Vaginal Vaginal introitus Host Body Product   Select from below... Abscess Amniotic fluid Bladder stone Blood Breast implant wound fluid Bronchial wash Caecal content Cerebrospinal fluid Dental plaque Feces Furuncle fluid Knee aspirate Lung aspirate Milk Mucus Nasopharyngeal aspirates Phlegm Pleural fluid Rectal swab Saliva Semen Sputum Stool Subgingival plaque Synovial fluid Throat swab Tracheal aspirate Urine Vaginal secretions Vaginal swab Vomit + Project Fields Project Name   NCBI BioProject Name   NCBI BioSample Accession   Specimen   Select from below... Biome Organism Sequencing Strategy   Select from below... ChIP-Sequencing Chloroplast DNA synthesis Exome FAIRE-Seq Genome fragments Metagenome Metatranscriptome Methylation Mitochondria Plasmid Resequencing Targeted Gene Survey Transcription Start Site Transcriptome Transposon Mutagenesis Sequencing Whole Genome Sequencing smRNA Project Status   Select from below... Abandoned Complete and Published Permanent Draft Proposed complete incomplete targeted Project Description   Sequencing Status   Select from below... Awaiting Sample Complete DNA Received Draft In progress Targeted Sequencing Quality   Select from below... Level 1: Standard Draft Level 2: High-Quality Draft Level 3: Improved-High-Quality Draft Level 4: Annotation-Directed Level 5: Non-contiguous Finished Level 6: Finished + Analysis Project Fields Analysis Project Type   Select from below... Combined Assembly Genome Analysis Genome from Metagenome Metagenome Analysis Metatranscriptome Analysis Metatranscriptome mapping (other) Metatranscriptome mapping (self) Single Cell Analysis (screened) Single Cell Analysis (unscreened) Targeted Gene Survey Transcriptome Analysis Completion Date = > < >= <= Select date: Description   Genbank ID   Select from below... With Genbank ID Without Genbank ID
Select Columns for Table Select Fields using the Checkboxes Toggle All * = required column   + ORGANISM INFORMATION GOLD Organism ID Organism Name Genus Genus Synonyms Species Species Synonyms Subspecies Strain Culture Collection Domain Phylum Viral Group Viral Subgroup NCBI Taxonomy ID NCBI Kingdom NCBI Phylum NCBI Class NCBI Order NCBI Family NCBI Genus NCBI Species Submitter's Organism Name Biosafety Level Comments Annotator Comments Cultured Culture Type Organism Type Uncultured Type Common Name Taxon DOI Exemplar DOI Exemplar Name Genbank 16S ID Serovar Strain Info ID Type Strain Habitat Terms Is Public Add Date + ORGANISM METADATA Cell Diameter Cell Shape Color Gram Stain Motility Oxygen Requirement Ph Salinity Pressure Sporulation Carbon Source Symbiont Name Symbiont Taxon ID Symbiotic Physical Interaction Symbiotic Relationship Temperature Optimum Temperature Range Cell Length Commercial Strain Commercial Strain Comments + ORGANISM ISOLATION Sample Collection Site Sample Isolation Comments Sample Collection Method Cruise Line Name Contact Name Contact Email + HOST METADATA Isolation Host Name Host Taxonomy ID Host Gender Host Race Host Age Host Health Condition Patient Visit Number Host Medication Medical Record Number Host Body Site Host Body Subsite Host Body Product Host Specificity or Range Host Comments + GOLD CLASSIFICATION Ecosystem Ecosystem Category Ecosystem Type Ecosystem Subtype Specific Ecosystem Ecosystem Suggestion + ENVIRONMENTAL INFORMATION Geographic Location Latitude Longitude Longhurst Code Altitude Depth Sample Collection Temperature Chlorophyll Concentration Nitrate Concentration Oxygen Concentration Salinity Concentration Growth Conditions
GOLD Organism ID Sort column:     Search:	Organism Name Sort column:     Search:	Add Date Sort column:     Search:
Go0333359	Blueberry fruit drop associated virus WA	2016-11-07
Go0333358	Wuhan Insect virus 4 YCYC03	2016-11-07
Go0333357	Epizootic haematopoietic necrosis virus	2016-11-07
Go0333356	Po-Circo-like virus 41	2016-11-07
Go0333355	Po-Circo-like virus 51	2016-11-07
Go0333354	Carrot mottle mimic virus satellite RNA Thessaloniki	2016-11-07
Go0333353	Peridroma alphabaculovirus GR_167	2016-11-07
Go0333352	Kobuvirus cattle/Kagoshima-1-22-KoV/2014/JPN	2016-11-07
Go0333351	Mycobacterium phage Sheen	2016-11-07
Go0333350	Opsiphanes invirae iflavirus 1 Brazilian/2012	2016-11-07
Go0333349	Tomato necrotic dwarf virus R	2016-11-07
Go0333348	Kobuvirus cattle/Kagoshima-2-24-KoV/2015/JPN	2016-11-07
Go0333347	Apis mellifera filamentous virus CH-CO5	2016-11-07
Go0333346	White sucker hepadnavirus RR173	2016-11-07
Go0333345	Binucleate Rhizoctonia mitovirus K1 FAS2909W	2016-11-07
Go0333344	Privet ringsport virus Win-01	2016-11-07
Go0333343	Cymbidium chlorotic mosaic virus Cym92-20	2016-11-07
Go0333342	Perigonia lusca single nucleopolyhedrovirus	2016-11-07
Go0333341	Atractylodes mild mottle virus AMMV-ES	2016-11-07
Go0333340	Staphylococcus phage SA97	2016-11-07
Go0333339	Simian adenovirus DM-2014 23336	2016-11-07
Go0333338	Mycobacterium phage MarQuardt	2016-11-07
Go0333337	Macrophomina phaseolina tobamo-like virus IL-01 2013	2016-11-07
Go0333336	Lactobacillus phage LBR48	2016-11-07
Go0333335	Escherichia phage K1-dep(4) K1G	2016-11-07

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